Taubman Institute Innovation Project finds new use for heart rate data
By Morgan Sherburne
If you become ill with COVID-19, your smartwatch can track the progression of your symptoms, and could even show how sick you become.
That’s according to a University of Michigan study that examined the effects of COVID-19 with six factors derived from heart rate data. The same method could be used to detect other diseases such as influenza, and the researchers say the approach could be used to track disease at home or when medical resources are scarce such as during a pandemic or in developing countries.
Following U-M students and medical interns throughout the country, the researchers discovered new signals embedded in heart rate indicating when individuals were infected with COVID and how sick they became. The researchers found that individuals with COVID experienced an increase in heart rate per step after symptom onset, and those with a cough had a much higher heart rate per step than those without a cough.
“We found that COVID dampened biological timekeeping signals, changed how your heart rate responds to activity, altered basal heart rate, and caused stress signals,” said Daniel Forger, a professor of in the U-M Department of Mathematics. “What we realized was knowledge of physiology, how the body works, and mathematics can help us get more information from these wearables.”
The researchers found that these measures were significantly altered and could show symptomatic versus healthy periods in the wearers’ lives.
“There’s been some previous work on understanding disease through wearable heart rate data, but I think we really take a different approach by focusing on decomposing the heart rate signal into multiple different components to take a multi-dimensional view of heart rate,” said Caleb Mayer, a graduate student in mathematics. “All of these components are based on different physiological systems. This really gives us additional information about disease progression and understanding how disease impacts these different physiological systems over time.”
These participants were drawn from the 2019 and 2020 cohorts of the Intern Health Study, a multi-site cohort study that follows physicians across several institutes in their first year of residency. Researchers also used information from the Roadmap College Student Data Set, a study that examined student health and well-being during the 2020-2021 academic year using wearable data from Fitbits, self-reported COVID-19 diagnoses and symptom information and publicly available data.
For this analysis, the researchers included individuals who reported a COVID positive test, symptoms and had wearable data from 50 days before symptom onset to 14 days after. In all, the researchers used data from 43 medical interns and 72 undergraduate and graduate students.
Specifically, the researchers found:
- Heart rate increase per step, a measure of cardiopulmonary dysfunction, increased after symptom onset.
- Heart rate per step was significantly higher in participants who reported a cough.
- Circadian phase uncertainty, the body’s inability to time daily events, increased around COVID symptom onset. Because this measure relates to the strength and consistency of the circadian component of the heart rate rhythm, this uncertainty may correspond to early signs of infection.
- Daily basal heart rate tended to increase on or before symptom onset. The researchers hypothesize this was because of fever or heightened anxiety.
- Heart rate tended to be more correlated around symptom onset, which could indicate the effects of the stress-related hormone adenosine.
The researchers used an algorithm that was originally developed to estimate daily circadian phase from wearable heart rate and step data. They looked at a baseline period of 35 to eight days before COVID symptom onset and an analysis period defined as seven to 14 days around COVID symptom onset. The researchers hope that with further testing, the same methods could enhance the pre-detection of COVID with wearables.
“The global outbreak of the SARS-CoV-2 virus imposed important public health measures, which impacted our daily lives. However, during this historical event in time, mobile technology offered enormous capabilities—the ability to monitor and collect physiological data longitudinally from individuals non-invasively and remotely,” said Sung Won Choi, associate professor of pediatrics at Michigan Medicine and a member of the Taubman Institute’s executive committee. “We were amazed at the U-M students’ willingness and desire to participate in this study, which was all done remotely, from recruitment to enrollment and onboarding. The work reported by Mayer and our team was really made possible not only through wearables sensors themselves, but the convergence of novel data analytics, remarkable advances in technology and computing power, and ‘team science’ intersection across research teams.”
This “team science” approach coalesced as a side product of the 2019 U-M Ideas lab, which included the team’s senior investigators.
Limitations for the study include that the work does not consider influenza-like illnesses, according to the researchers. Future work should focus on whether the findings reflect the effects of COVID-19 or whether these effects will persist in other illnesses. The researchers were also not able to account for the effects of factors such as age, gender or BMI, nor the seasonality effects in the data—that is, whether the data was taken during a period of time where flu or other disease transmission is high.
The researchers say this work establishes algorithms that can be used to understand illnesses’ impact on heart rate physiology, which can form the basis for medical professionals might deploy the use of wearables in health care.
“Identifying the varying patterns of different heart rate parameters derived from wearables across the course of COVID-19 infection is a substantial advance for the field,” said Srijan Sen, co-author of the study and director of the U-M Depression Center. “This work can help us more meaningfully follow populations in future COVID-19 waves. The study also demonstrates following cohorts with mobile technology and robust data sharing can facilitate unanticipated and valuable discoveries.”
Forger is the Robert W. and Lynn H. Browne Professor of Science and research professor of computational medicine and bioinformatics at Michigan Medicine. Sen is a former Taubman Emerging Scholar, also the Frances and Kenneth Eisenberg Professor of Depression and Neurosciences, professor of psychiatry, research professor in the Michigan Neurosciences Institute, and adjunct professor of psychology. Choi is also a former Taubman Emerging Scholar as well as the Edith S. Briskin and Shirley K. Schlafer Foundation Research Professor of Pediatrics. Coauthors of the study include U-M researchers Jonathan Tyler, Yu Fang, Christopher Flora, Elena Frank and Muneesh Tewari.
This work was supported by the National Institutes of Health, the Human Frontier Science Program, the National Science Foundation and a Taubman Institute Innovation Project grant.